PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_4AS_45B416B25.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 287aa    MW: 31311 Da    PI: 8.7028
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_4AS_45B416B25.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.95.8e-1085139559
                            CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                            kr++r   NR +A rs +RK  ++ eLe+kv++L++e ++L  +l   +     l
  Traes_4AS_45B416B25.1  85 KRAKRILANRQSAARSKERKARYMTELERKVQTLQTEATTLSAQLTLFQRDTTGL 139
                            9****************************************99988776665555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.3E-1581145IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.66883146IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.84E-1185136No hitNo description
Gene3DG3DSA:1.20.5.1703.1E-1085139No hitNo description
PfamPF001701.0E-885139IPR004827Basic-leucine zipper domain
CDDcd147034.32E-2086135No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    Send to blast
MDIEKISSGP AAGSDRDRDR AAETSSPPRP KHRYSSSVDG SGLFSAAGSA ARRDAAAAQA  60
LADVLEAKKA MSPEQLAELA AIDPKRAKRI LANRQSAARS KERKARYMTE LERKVQTLQT  120
EATTLSAQLT LFQRDTTGLS SENAELKIRL QAMEQQAQLR DALNDALKQE VERLKMATGE  180
MSNSSDAYSV GLQHVLYNSS FFPQSQQNTA QHQGGARFPP PFHLPHPNVP NHQMLSHPNT  240
LSDIMQQDHL ARLQGLDISK GHPVVKSESS SISASESSIE IRCNPSC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3692850.0AK369285.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2088F01.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003557964.11e-159PREDICTED: transcription factor RF2b
SwissprotQ6S4P41e-144RF2B_ORYSJ; Transcription factor RF2b
TrEMBLW5DX300.0W5DX30_WHEAT; Uncharacterized protein
STRINGMLOC_60045.11e-164(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26833683
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40620.13e-69bZIP family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]